tfcb_2020

Homework 4: Practical Python with BioPython

This assignment includes material from lectures 8 and 9.

Each question is worth 10 points, for a total of 30 points in this assignment. Please include code to address each of the following questions, and code comments to explain what your code is attempting to accomplish. Don’t forget to include references to the sources you used to obtain your answer, including your classmates (if you are working in groups). A failure to include code comments and to cite your sources (if applicable) will result in a reduction in your grade.

If you have difficulty viewing this notebook in GitHub, copy the URL to the page and paste it into nbviewer to render.

Instructions:

• Pull the most recent changes from GitHub into your local copy of the repository.
• Add your code to the notebook to answer each question. The data file from lectures 8/9 has been included for your convenience. You may find it useful to view the material presented in those lectures. A copy of the data file has been included here for your convenience.
• Make sure your entire notebook is executable, and has been executed in order (in the “Cell” menu, select “Run All”)